{
  "_id": "6a1bd3211d7bb097a0a14cdf",
  "Package": "WtAgeRe",
  "Type": "Package",
  "Title": "Fish Body Mass at Age Estimation",
  "Version": "0.1.0",
  "Authors@R": "person(\"Jim\", \"Ianelli\", email = \"Jim.Ianelli@noaa.gov\", role = c(\"aut\", \"cre\"))",
  "Description": "A random effects model for estimating variance in\nweight-at-age, with utilities to read ADMB outputs and plot\nweight-at-age anomalies.",
  "License": "CC0-1.0",
  "URL": "https://afsc-assessments.github.io/WtAgeRe/",
  "Encoding": "UTF-8",
  "Roxygen": "list(markdown = TRUE)",
  "RoxygenNote": "7.3.3",
  "VignetteBuilder": "knitr",
  "Config/pak/sysreqs": "libicu-dev",
  "Repository": "https://jimianelli.r-universe.dev",
  "Date/Publication": "2026-02-19 16:00:54 UTC",
  "RemoteUrl": "https://github.com/afsc-assessments/WtAgeRe",
  "RemoteRef": "HEAD",
  "RemoteSha": "dbc2f7e98b9e41f6e89c887f94cbc039e1c82317",
  "NeedsCompilation": "yes",
  "Packaged": {
    "Date": "2026-05-31 06:01:09 UTC",
    "User": "root"
  },
  "Author": "Jim Ianelli [aut, cre]",
  "Maintainer": "Jim Ianelli <Jim.Ianelli@noaa.gov>",
  "MD5sum": "18f29831bf45cb4810607c10db47e4ab",
  "_user": "jimianelli",
  "_type": "src",
  "_file": "WtAgeRe_0.1.0.tar.gz",
  "_fileid": "1a0601e4f124b3d216e61af9db3a2bc6dc26e084e684bd62fc8e8455fe91e941",
  "_filesize": 10772198,
  "_sha256": "1a0601e4f124b3d216e61af9db3a2bc6dc26e084e684bd62fc8e8455fe91e941",
  "_created": "2026-05-31T06:01:09.000Z",
  "_published": "2026-05-31T06:20:17.375Z",
  "_distro": "noble",
  "_jobs": [
    {
      "job": 78704093053,
      "time": 145,
      "config": "linux-devel-arm64",
      "r": "4.7.0",
      "check": "WARNING",
      "artifact": "7314269322"
    },
    {
      "job": 78704093062,
      "time": 127,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "WARNING",
      "artifact": "7314267769"
    },
    {
      "job": 78704093055,
      "time": 143,
      "config": "linux-release-arm64",
      "r": "4.6.0",
      "check": "WARNING",
      "artifact": "7314269132"
    },
    {
      "job": 78704093066,
      "time": 122,
      "config": "linux-release-x86_64",
      "r": "4.6.0",
      "check": "WARNING",
      "artifact": "7314267296"
    },
    {
      "job": 78704093099,
      "time": 82,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "WARNING",
      "artifact": "7314305370"
    },
    {
      "job": 78704093069,
      "time": 186,
      "config": "macos-oldrel-x86_64",
      "r": "4.5.3",
      "check": "WARNING",
      "artifact": "7314307471"
    },
    {
      "job": 78704093072,
      "time": 104,
      "config": "macos-release-arm64",
      "r": "4.6.0",
      "check": "WARNING",
      "artifact": "7314303367"
    },
    {
      "job": 78704093104,
      "time": 754,
      "config": "macos-release-x86_64",
      "r": "4.6.0",
      "check": "WARNING",
      "artifact": "7314369315"
    },
    {
      "job": 78703902954,
      "time": 178,
      "config": "source",
      "r": "4.6.0",
      "check": "ERROR",
      "artifact": "7314255432"
    },
    {
      "job": 78704093054,
      "time": 104,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7314265631"
    },
    {
      "job": 78704093061,
      "time": 64,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "FAIL",
      "artifact": ""
    },
    {
      "job": 78704093046,
      "time": 145,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "FAIL",
      "artifact": ""
    },
    {
      "job": 78704093045,
      "time": 98,
      "config": "windows-release",
      "r": "4.6.0",
      "check": "FAIL",
      "artifact": ""
    }
  ],
  "_buildurl": "https://github.com/r-universe/jimianelli/actions/runs/26569783421",
  "_status": "failure",
  "_host": "GitHub-Actions",
  "_upstream": "https://github.com/afsc-assessments/WtAgeRe",
  "_commit": {
    "id": "dbc2f7e98b9e41f6e89c887f94cbc039e1c82317",
    "author": "Jim Ianelli <jim.ianelli@gmail.com>",
    "committer": "Jim Ianelli <jim.ianelli@gmail.com>",
    "message": "Make ADMB build optional and add RTMB age-error support\n",
    "time": 1771516854
  },
  "_maintainer": {
    "name": "Jim Ianelli",
    "email": "jim.ianelli@noaa.gov",
    "login": "jimianelli-noaa",
    "description": "Senior Scientist at NOAA",
    "uuid": 53797573
  },
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 4.1.0",
      "role": "Depends"
    },
    {
      "package": "dplyr",
      "role": "Imports"
    },
    {
      "package": "tidyr",
      "role": "Imports"
    },
    {
      "package": "ggplot2",
      "role": "Imports"
    },
    {
      "package": "scales",
      "role": "Imports"
    },
    {
      "package": "knitr",
      "role": "Suggests"
    },
    {
      "package": "RTMB",
      "role": "Suggests"
    },
    {
      "package": "rmarkdown",
      "role": "Suggests"
    }
  ],
  "_owner": "afsc-assessments",
  "_selfowned": false,
  "_usedby": 0,
  "_updates": [
    {
      "week": "2026-08",
      "n": 11
    }
  ],
  "_tags": [],
  "_stars": 1,
  "_contributors": [
    {
      "user": "jimianelli",
      "count": 17,
      "uuid": 2715618
    },
    {
      "user": "zandjyo",
      "count": 2,
      "uuid": 5395237
    }
  ],
  "_userbio": {
    "uuid": 2715618,
    "type": "user",
    "name": "Jim Ianelli"
  },
  "_downloads": {
    "count": 0,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/WtAgeRe"
  },
  "_devurl": "https://github.com/afsc-assessments/wtagere",
  "_pkgdown": "https://afsc-assessments.github.io/WtAgeRe/",
  "_searchresults": 0,
  "_rbuild": "4.6.0",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/readme.html",
    "extra/readme.md",
    "extra/WtAgeRe.html",
    "manual.pdf"
  ],
  "_cranurl": false,
  "_exports": [
    "colr",
    "fit_wt_rtmb",
    "fn_get_pred",
    "fn_plot_anoms",
    "make_age_error_matrix",
    "make_wt_rtmb_data",
    "read_admb",
    "read_ctl",
    "read_dat",
    "read_fit",
    "read_psv",
    "read_rep",
    "replace_zeros_with_mean",
    "replace_zeros_with_two",
    "write_dat",
    "write_wt_rtmb_true_values",
    "wt_rtmb_report",
    "wt_rtmb_true_values"
  ],
  "_help": [
    {
      "page": "colr",
      "title": "Transparent colors",
      "topics": [
        "colr"
      ]
    },
    {
      "page": "fn_get_pred",
      "title": "Get predicted weight-at-age",
      "topics": [
        "fn_get_pred"
      ]
    },
    {
      "page": "fn_plot_anoms",
      "title": "Plot weight-at-age anomalies",
      "topics": [
        "fn_plot_anoms"
      ]
    },
    {
      "page": "read_admb",
      "title": "Read ADMB output files",
      "topics": [
        "read_admb"
      ]
    },
    {
      "page": "read_ctl",
      "title": "Read ADMB .ctl file",
      "topics": [
        "read_ctl"
      ]
    },
    {
      "page": "read_dat",
      "title": "Read ADMB data files",
      "topics": [
        "read_dat"
      ]
    },
    {
      "page": "read_fit",
      "title": "Read ADMB .par, .std, and .cor file and return an R object of type 'list' of estimates and correlations",
      "topics": [
        "read_fit"
      ]
    },
    {
      "page": "read_psv",
      "title": "Read ADMB .psv file",
      "topics": [
        "read_psv"
      ]
    },
    {
      "page": "read_rep",
      "title": "Read ADMB .rep file",
      "topics": [
        "read_rep"
      ]
    },
    {
      "page": "replace_zeros_with_mean",
      "title": "Replace outliers with mean for mean weight-at-age",
      "topics": [
        "replace_zeros_with_mean"
      ]
    },
    {
      "page": "replace_zeros_with_two",
      "title": "Replace zeros with near-two for SD",
      "topics": [
        "replace_zeros_with_two"
      ]
    },
    {
      "page": "write_dat",
      "title": "Write ADMB data file",
      "topics": [
        "write_dat"
      ]
    }
  ],
  "_readme": "https://github.com/afsc-assessments/WtAgeRe/raw/HEAD/README.md",
  "_rundeps": [
    "cli",
    "cpp11",
    "dplyr",
    "farver",
    "generics",
    "ggplot2",
    "glue",
    "gtable",
    "isoband",
    "labeling",
    "lifecycle",
    "magrittr",
    "pillar",
    "pkgconfig",
    "purrr",
    "R6",
    "RColorBrewer",
    "rlang",
    "S7",
    "scales",
    "stringi",
    "stringr",
    "tibble",
    "tidyr",
    "tidyselect",
    "utf8",
    "vctrs",
    "viridisLite",
    "withr"
  ],
  "_score": 1.6989700043360187,
  "_indexed": false,
  "_nocasepkg": "wtagere",
  "_universes": [
    "jimianelli"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "0.1.0",
      "date": "2026-05-31T06:03:37.000Z",
      "distro": "noble",
      "arch": "aarch64",
      "commit": "dbc2f7e98b9e41f6e89c887f94cbc039e1c82317",
      "fileid": "6b9167b83f159dfe9ec53b0e725a907de87d9105551d6ef26141b77dde748690",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/jimianelli/actions/runs/26569783421"
    },
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "0.1.0",
      "date": "2026-05-31T06:03:19.000Z",
      "distro": "noble",
      "arch": "x86_64",
      "commit": "dbc2f7e98b9e41f6e89c887f94cbc039e1c82317",
      "fileid": "6de972a2dea9f45e75ad5c033e056462438acf20f258fe4b6ea3263b8bdbd50f",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/jimianelli/actions/runs/26569783421"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "0.1.0",
      "date": "2026-05-31T06:03:35.000Z",
      "distro": "noble",
      "arch": "aarch64",
      "commit": "dbc2f7e98b9e41f6e89c887f94cbc039e1c82317",
      "fileid": "798ebf942ed06260ca84261a9d11464cd9de45988a6484f2ea75c7193a0ec8b8",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/jimianelli/actions/runs/26569783421"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "0.1.0",
      "date": "2026-05-31T06:03:15.000Z",
      "distro": "noble",
      "arch": "x86_64",
      "commit": "dbc2f7e98b9e41f6e89c887f94cbc039e1c82317",
      "fileid": "17db5136acec8bd742d1bb8e1c7b84ab7ac1175127215185fa3a53941ffe57d2",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/jimianelli/actions/runs/26569783421"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "0.1.0",
      "date": "2026-05-31T06:09:39.000Z",
      "arch": "aarch64",
      "commit": "dbc2f7e98b9e41f6e89c887f94cbc039e1c82317",
      "fileid": "dbda7152d83873f6b155bcb9e1f4a0be2b19be25518bb3b8f552f71f25261e0f",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/jimianelli/actions/runs/26569783421"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "0.1.0",
      "date": "2026-05-31T06:09:43.000Z",
      "arch": "x86_64",
      "commit": "dbc2f7e98b9e41f6e89c887f94cbc039e1c82317",
      "fileid": "f43b84fbcd430d0caabfc1b629bf7a5238e873cc2f95eb5ca8be11b0d2fbe92e",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/jimianelli/actions/runs/26569783421"
    },
    {
      "r": "4.6.0",
      "os": "mac",
      "version": "0.1.0",
      "date": "2026-05-31T06:09:16.000Z",
      "arch": "aarch64",
      "commit": "dbc2f7e98b9e41f6e89c887f94cbc039e1c82317",
      "fileid": "6473cc460516383d1e7582fef4d753ebea841750b083c33a3084abfa6b89939c",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/jimianelli/actions/runs/26569783421"
    },
    {
      "r": "4.6.0",
      "os": "mac",
      "version": "0.1.0",
      "date": "2026-05-31T06:19:36.000Z",
      "arch": "x86_64",
      "commit": "dbc2f7e98b9e41f6e89c887f94cbc039e1c82317",
      "fileid": "7469d8eaaabef3ed4ed1f4e337499bc3d4e8b10720eea674dd0ddba97f7fe986",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/jimianelli/actions/runs/26569783421"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "0.1.0",
      "date": "2026-05-31T06:03:07.000Z",
      "arch": "emscripten",
      "commit": "dbc2f7e98b9e41f6e89c887f94cbc039e1c82317",
      "fileid": "79e3756769a6a2b9faf609c4d1a4d01413acf896a9a8a325091176750e5a3cc4",
      "status": "success",
      "buildurl": "https://github.com/r-universe/jimianelli/actions/runs/26569783421"
    }
  ]
}