{ "_id": "6acdf61ba14063b82c3ad982", "Package": "nwfscAgeingError", "Type": "Package", "Title": "Source Code for Punt et al. (2008): Ageing Error and Imprecision", "Version": "1.3.3", "Authors@R": "c(\nperson(\ngiven = c(\"Kelli\", \"F.\"),\nfamily = \"Johnson\",\nemail = \"kelli.johnson@noaa.gov\",\nrole = c(\"aut\", \"cre\"),\ncomment = c(ORCID = \"0000-0002-5149-451X\")\n),\nperson(\ngiven = c(\"Andre\", \"E.\"),\nfamily = \"Punt\",\nrole = \"aut\",\ncomment = c(ORCID = \"0000-0001-8489-2488\")\n),\nperson(\ngiven = c(\"James\", \"T.\"),\nfamily = \"Thorson\",\nrole = \"aut\",\ncomment = c(ORCID = \"0000-0001-7415-1010\")\n),\nperson(\ngiven = c(\"Ian\", \"G.\"),\nfamily = \"Taylor\",\nrole = \"aut\",\ncomment = c(ORCID = \"0000-0001-8489-2488\")\n),\nperson(\ngiven = c(\"Ian\", \"J.\"),\nfamily = \"Stewart\",\nrole = \"ctb\"\n),\nperson(\ngiven = c(\"Melissa\", \"A.\"),\nfamily = \"Haltuch\",\nrole = \"ctb\",\ncomment = c(ORCID = \"0000-0003-2821-1267\")\n)\n)", "Description": "Source code and examples for how to use double-read data\nto estimate ageing imprecision and bias from fishery otoliths.\nThe code was developed for Punt et al. (2008) and updated in\n2022.", "URL": "http://github.com/pfmc-assessments/nwfscAgeingError", "BugReports": "http://github.com/pfmc-assessments/nwfscAgeingError/issues", "License": "GPL-2", "Encoding": "UTF-8", "RoxygenNote": "7.2.1", "Roxygen": "list(markdown = TRUE)", "Repository": "https://jimianelli.r-universe.dev", "Date/Publication": "2022-10-26 21:41:15 UTC", "RemoteUrl": "https://github.com/jimianelli/nwfscAgeingError", "RemoteRef": "HEAD", "RemoteSha": "f9a8caad080d3db25e19591e93e90b4e8a2ee7f5", "NeedsCompilation": "yes", "Packaged": { "Date": "2026-10-13 09:00:03 UTC", "User": "root" }, "Author": "Kelli F. Johnson [aut, cre] (ORCID:\n),\nAndre E. Punt [aut] (ORCID: ),\nJames T. Thorson [aut] (ORCID: ),\nIan G. Taylor [aut] (ORCID: ),\nIan J. Stewart [ctb],\nMelissa A. Haltuch [ctb] (ORCID:\n)", "Maintainer": "Kelli F. Johnson ", "_user": "jimianelli", "_type": "src", "_file": "nwfscAgeingError_1.3.3.tar.gz", "_fileid": "https://r2.ropensci.org/d6b7fd8777b710a99abe8d1917253de03a460f07f549191136db71b6517e5d28", "_filesize": 257165, "_sha256": "d6b7fd8777b710a99abe8d1917253de03a460f07f549191136db71b6517e5d28", "_expires": "2027-01-21T09:12:57.000Z", "_created": "2026-10-13T09:00:03.000Z", "_published": "2026-10-13T09:12:59.475Z", "_buildurl": "https://github.com/r-universe/jimianelli/actions/runs/38372824303", "_status": "success", "_host": "GitHub-Actions", "_jobs": [ { "job": 115215043765, "time": 96, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "WARNING", "artifact": "11799378938" }, { "job": 115215043750, "time": 121, "config": "linux-release-x86_64", "r": "4.6.1", "check": "WARNING", "artifact": "11800615101" }, { "job": 115215043821, "time": 103, "config": "macos-oldrel-arm64", "r": "4.5.3", "check": "WARNING", "artifact": "11800299336" }, { "job": 115215043646, "time": 93, "config": "macos-release-arm64", "r": "4.6.1", "check": "WARNING", "artifact": "11800686240" }, { "job": 115214001880, "time": 152, "config": "source", "r": "4.6.1", "check": "OK", "artifact": "11799707579" }, { "job": 115215043620, "time": 94, "config": "wasm-release", "r": "4.6.0", "check": "OK", "artifact": "11799488197" }, { "job": 115215043654, "time": 51, "config": "windows-devel-x86_64", "r": "4.7.0", "check": "WARNING", "artifact": "11800575042" }, { "job": 115215043618, "time": 57, "config": "windows-oldrel-x86_64", "r": "4.5.3", "check": "WARNING", "artifact": "11799478023" }, { "job": 115215043479, "time": 52, "config": "windows-release-x86_64", "r": "4.6.1", "check": "WARNING", "artifact": "11799443750" } ], "_upstream": "https://github.com/jimianelli/nwfscAgeingError", "_commit": { "id": "f9a8caad080d3db25e19591e93e90b4e8a2ee7f5", "author": "kellijohnson-NOAA ", "committer": "kellijohnson-NOAA ", "message": "Updates GitHub organization\n", "time": 1666820475 }, "_maintainer": { "name": "Kelli F. Johnson", "email": "kelli.johnson@noaa.gov", "login": "kellijohnson-noaa", "orcid": "0000-0002-5149-451X", "description": "Project Lead of the Fisheries Integrated Modeling System (FIMS), National Stock Assessment Program, Office of Science and Technology, NOAA Fisheries", "uuid": 4108564 }, "_distro": "resolute", "_registered": true, "_dependencies": [], "_owner": "jimianelli", "_selfowned": true, "_usedby": 0, "_updates": [], "_tags": [], "_stars": 0, "_contributors": [ { "user": "iantaylor-noaa", "count": 48, "uuid": 4992918 }, { "user": "james-thorson", "count": 13, "uuid": 7989837 }, { "user": "kellijohnson-noaa", "count": 10, "uuid": 4108564 } ], "_userbio": { "uuid": 2715618, "type": "user", "name": "Jim Ianelli", "followers": 84 }, "_downloads": { "count": 0, "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/nwfscAgeingError" }, "_devurl": "https://github.com/pfmc-assessments/nwfscageingerror", "_searchresults": 7, "_rbuild": "4.6.1", "_assets": [ "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/contents.json", "extra/manual.pdf", "extra/NEWS.html", "extra/NEWS.txt", "extra/nwfscAgeingError.html", "extra/readme.html", "extra/readme.md" ], "_cranurl": false, "_exports": [ "ageing_comparison", "cMx", "estgrowth.vb", "PlotOutputFn", "rMx", "RunFn", "SimulatorFn", "StepwiseFn" ], "_help": [ { "page": "ageing_comparison", "title": "Plot comparison of double age readings", "topics": [ "ageing_comparison" ] }, { "page": "cMx", "title": "Make a column matrix", "topics": [ "cMx" ] }, { "page": "estgrowth.vb", "title": "Calculate von Bertanlaffy Growth Parameters from Lengths and Ages", "topics": [ "estgrowth.vb" ] }, { "page": "nwfscAgeingError", "title": "Ageing error software", "topics": [ "nwfscAgeingError" ] }, { "page": "PlotOutputFn", "title": "Plot output", "topics": [ "PlotOutputFn" ] }, { "page": "rMx", "title": "Make a row matrix", "topics": [ "rMx" ] }, { "page": "RunFn", "title": "Run ageing error model", "topics": [ "RunFn" ] }, { "page": "SimulatorFn", "title": "Simulate double reading data", "topics": [ "SimulatorFn" ] }, { "page": "StepwiseFn", "title": "Step-wise model selection", "topics": [ "StepwiseFn" ] } ], "_readme": "https://github.com/jimianelli/nwfscAgeingError/raw/HEAD/README.md", "_rundeps": [], "_score": 2, "_indexed": true, "_nocasepkg": "nwfscageingerror", "_universes": [ "jimianelli", "kellijohnson-noaa", "pfmc-assessments" ], "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "1.3.3", "date": "2026-10-13T09:01:44.000Z", "distro": "resolute", "commit": "f9a8caad080d3db25e19591e93e90b4e8a2ee7f5", "fileid": "https://r2.ropensci.org/283b61fba9f5dfbf311598cb81e95cc13234f103ec605f7c15bcb18f2625efa8", "status": "success", "check": "WARNING", "buildurl": "https://github.com/r-universe/jimianelli/actions/runs/38372824303" }, { "r": "4.6.1", "os": "linux", "version": "1.3.3", "date": "2026-10-13T09:02:08.000Z", "distro": "resolute", "commit": "f9a8caad080d3db25e19591e93e90b4e8a2ee7f5", "fileid": "https://r2.ropensci.org/df666df2ffe094fdd04b3b5a40bee9a73365da5cfe529666b77882a4d14d3d07", "status": "success", "check": "WARNING", "buildurl": "https://github.com/r-universe/jimianelli/actions/runs/38372824303" }, { "r": "4.5.3", "os": "mac", "version": "1.3.3", "date": "2026-10-13T09:12:31.000Z", "commit": "f9a8caad080d3db25e19591e93e90b4e8a2ee7f5", "fileid": "https://r2.ropensci.org/2360f018ab25c95f2ced052a7ba5408595da22b75c9ae1d3da56870aa4ec4d3d", "status": "success", "check": "WARNING", "buildurl": "https://github.com/r-universe/jimianelli/actions/runs/38372824303" }, { "r": "4.6.1", "os": "mac", "version": "1.3.3", "date": "2026-10-13T09:12:07.000Z", "commit": "f9a8caad080d3db25e19591e93e90b4e8a2ee7f5", "fileid": "https://r2.ropensci.org/9225df984763bd67c28beba70db5ef493fd17d604482396dc4d9145d45bf045f", "status": "success", "check": "WARNING", "buildurl": "https://github.com/r-universe/jimianelli/actions/runs/38372824303" }, { "r": "4.6.0", "os": "wasm", "version": "1.3.3", "date": "2026-10-13T09:01:50.000Z", "commit": "f9a8caad080d3db25e19591e93e90b4e8a2ee7f5", "fileid": "https://r2.ropensci.org/22f2edcd8ebbbc6a5de391f059bdb23c5d92ca0383b73d1628fa1a2ac24d5a00", "status": "success", "buildurl": "https://github.com/r-universe/jimianelli/actions/runs/38372824303" }, { "r": "4.7.0", "os": "win", "version": "1.3.3", "date": "2026-10-13T09:00:54.000Z", "commit": "f9a8caad080d3db25e19591e93e90b4e8a2ee7f5", "fileid": "https://r2.ropensci.org/4a5c223c6c7c4038b1c3a959ad5a7c1d503405509dbccf732ab8f4d2962d1adc", "status": "success", "check": "WARNING", "buildurl": "https://github.com/r-universe/jimianelli/actions/runs/38372824303" }, { "r": "4.5.3", "os": "win", "version": "1.3.3", "date": "2026-10-13T09:01:01.000Z", "commit": "f9a8caad080d3db25e19591e93e90b4e8a2ee7f5", "fileid": "https://r2.ropensci.org/2712e62ee8945ba75b9bff8010e3d5d13345a581a7ee47eceb55903ed32cccc3", "status": "success", "check": "WARNING", "buildurl": "https://github.com/r-universe/jimianelli/actions/runs/38372824303" }, { "r": "4.6.1", "os": "win", "version": "1.3.3", "date": "2026-10-13T09:00:54.000Z", "commit": "f9a8caad080d3db25e19591e93e90b4e8a2ee7f5", "fileid": "https://r2.ropensci.org/1ed175f348ced62fb50917c41db60d8eb68824891f258726939601c833e646ca", "status": "success", "check": "WARNING", "buildurl": "https://github.com/r-universe/jimianelli/actions/runs/38372824303" } ] }