Package 'planteam'

Catch report generator

Description

Catch report generator

Usage

catch_report(
  title,
  authors,
  stock,
  area,
  year,
  last_full_year,
  next_full_year,
  catch_data_date,
  output_dir = NULL
)

Arguments

title	what do you want to call it?
authors	who are the authors
stock	a lowercase shorthand that matches with the data file https://docs.google.com/spreadsheets/d/1uHmCuY3GXfSBCbsP61nAQeATBfoslXeS3PQNLlioWIk/edit#gid=0
area	lowercase typically "GOA" or "BSAI", though other "BSAI" areas can be called (e.g., Bogoslof) - must match the google sheet names
year	current year
last_full_year	last year that a full assessment was done
next_full_year	next year that a full assessment is scheduled to occur
catch_data_date	date that catch data are through, e.g., "November 5, 2023"
output_dir	default output is the project, if you have a year folder the something like "2023" to id which folder to place the results in

Examples

/dontrun{
catch_report(title = "1.B. Assessment of walleye pollock in the Bogoslof Island Region",
             authors = "James N. Ianelli, S. J. Barbeaux, Ivonne Ortiz, and D. McKelvey",
             stock = "pollock",
             area = "Bogoslof",
             year = 2023,
             last_full_year = 2021,
             next_full_year = 2024,
             catch_data_date = "November 5, 2023",
             output_dir = "2023")
}

---

Send AKRO catch data to the plan team google sheet

Description

Send AKRO catch data to the plan team google sheet

Usage

catch_to_sheet(year, data, area)

Arguments

year	current year
data	catch data file
area	'goa' or 'bsai' - currently this only works for 'goa'

Examples

/dontrun{
catch_to_sheet(year=2023, data=goa_nov_catch, area='goa')
}

---

age plus group to biomass name

Description

age plus group to biomass name

Usage

nameit(data)

Arguments

data	input dataframe

---

read in specs dataframe

Description

read in specs dataframe

Usage

read_specs(
  path,
  year,
  range = "A5:L91",
  col_names = c("species", "area", "0ofl", "0abc", "0tac", "0catch", "1ofl", "1abc",
    "1tac", "1catch", "2ofl", "2abc"),
  col_types = c("text", "text", rep("numeric", 10))
)

Arguments

path	location of file
year	current year
range	the range of cells to include from the spreadsheet default:A5:L91
col_names	specify names of all columns included
col_types	specify column types of all columns included

Examples

## Not run: 
read_specs('data/goa_specs2022.xlxs', col_names = c("species", "area", "0ofl", "0abc", "0tac", "0catch", "1ofl", "1abc", "1tac", "1catch", "2ofl", "2abc"), col_types = c("text", "text", rep("numeric", 10)))

## End(Not run)

---

Create an Excel specs table

Description

Create an Excel specs table

Usage

spec_table(year, month = "sep", area = "goa", catch_date = "11/9/2023")

Arguments

year	current year
month	sep or nov specs
area	goa or bsai
catch_date	date that catch dat is pulled e.g., ("9/10/2023")

Examples

/dontrun{
spec_table(year, month = "sep", area = "goa", catch_date="11/9/2023")
}

---